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2003
Iliopoulos, Ioannis, S. Tsoka, M. A. Andrade, A. J. Enright, M. Carroll, P. Poullet, V. J. Promponas, T. D. Liakopoulos, G. A. Palaios, C. M. Pasquier et al. "Evaluation of annotation strategies using an entire genome sequence." Bioinformatics (Oxford, England) 19 (2003): 717-726.
Vernikos, G. S., C. G. Gkogkas, V. J. Promponas, and S. J. Hamodrakas. "GeneViTo: visualizing gene-product functional and structural features in genomic datasets." BMC bioinformatics 4 (2003): 53.
2001
Pasquier, C. M., V. J. Promponas, and S. J. Hamodrakas. "PRED-CLASS: cascading neural networks for generalized protein classification and genome-wide applications." Proteins 44 (2001): 361-369.
2000
Promponas, V. J., A. J. Enright, S. Tsoka, D. P. Kreil, C. Leroy, S. J. Hamodrakas, C. Sander, and Christos A. Ouzounis. "CAST: an iterative algorithm for the complexity analysis of sequence tracts." Bioinformatics (Oxford, England) 16 (2000): 915-922.
1999
Promponas, V. J., G. A. Palaios, C. M. Pasquier, J. S. Hamodrakas, and S. J. Hamodrakas. "CoPreTHi: a Web tool which combines transmembrane protein segment prediction methods." In silico biology 1 (1999): 159-162.
Pasquier, C. M., V. J. Promponas, G. A. Palaios, J. S. Hamodrakas, and S. J. Hamodrakas. "A novel method for predicting transmembrane segments in proteins based on a statistical analysis of the SwissProt database: the PRED-TMR algorithm." Protein engineering 12 (1999): 381-385.
Tsoka, S., V. J. Promponas, and Christos A. Ouzounis. "Reproducibility in genome sequence annotation: the Plasmodium falciparum chromosome 2 case." FEBS letters 451 (1999): 354-355.
1998
Pasquier, C. M., V. J. Promponas, N. J. Varvayannis, and S. J. Hamodrakas. "A web server to locate periodicities in a sequence." Bioinformatics (Oxford, England) 14 (1998): 749-750.

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by Dr. Radut.