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BRL publications

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2012
Psomopoulos, Fotis E., Victoria I. Siarkou, Nikolas Papanikolaou, Ioannis Iliopoulos, Athanasios S. Tsaftaris, V. J. Promponas, and Christos A. Ouzounis. "The chlamydiales pangenome revisited: structural stability and functional coherence." Genes 3, no. 2 (2012): 291-319.
Kountouris, P., M. Agathocleous, V. J. Promponas, G. Christodoulou, S. Hadjicostas, V. Vassiliades, and C. Christodoulou. "A Comparative Study on Filtering Protein Secondary Structure Prediction." Computational Biology and Bioinformatics, IEEE/ACM Transactions on PP (2012): 1.
2011
Papanikolaou, Nikolas, Evangelos Pafilis, Stavros Nikolaou, Christos A. Ouzounis, Ioannis Iliopoulos, and V. J. Promponas. "BioTextQuest: a web-based biomedical text mining suite for concept discovery." Bioinformatics (Oxford, England) 27, no. 23 (2011): 3327-8.
Theodosiou, Athina, and V. J. Promponas. "LaTcOm: a web server for visualizing rare codon clusters in coding sequences." Bioinformatics (Oxford, England) (2011).
KIRSCHEL, A. N. G., M. L. CODY, Z. T. HARLOW, V. J. Promponas, E. E. VALLEJO, and C. E. TAYLOR. "Territorial dynamics of Mexican Ant-thrushes Formicarius moniliger revealed by individual recognition of their songs." Ibis (2011).
2010
Agathocleous, M., G. Christodoulou, V. J. Promponas, C. Christodoulou, V. Vassiliades, and A. Antoniou. "Protein Secondary Structure Prediction with Bidirectional Recurrent Neural Nets: Can Weight Updating for Each Residue Enhance Performance?" Artificial Intelligence Applications and Innovations (2010): 128-137.
Ioannou, A., K. Fokianos, and V. J. Promponas. "Spectral density ratio based clustering methods for the binary segmentation of protein sequences: A comparative study." BioSystems 100 (2010): 132-143.
Nikolaou, N., P. Sampaziotis, M. Aplikioti, A. Drakos, Ioannis Kirmitzoglou, M. Argyrou, N. Papamarkos, and V. J. Promponas. "VeSTIS: A Versatile Semi-Automatic Taxon Identification System from Digital Images." (2010).
2009
Papanikolaou, N., K. Trachana, T. Theodosiou, V. J. Promponas, and Ioannis Iliopoulos. "Gene socialization: gene order, GC content and gene silencing in Salmonella." BMC genomics 10 (2009): 597.
Promponas, V. J.. "A simple clustering approach for pathogenic strain identification based on local and global amino acid compositional signatures from genomic sequences: the Escherichia genus case." In Information Technology and Applications in Biomedicine, 2009. ITAB 2009. 9th International Conference on, 1-4. IEEE, 2009.

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by Dr. Radut.