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BRL publications

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2011
Theodosiou, Athina, and V. J. Promponas. "LaTcOm: a web server for visualizing rare codon clusters in coding sequences." Bioinformatics (Oxford, England) (2011).
KIRSCHEL, A. N. G., M. L. CODY, Z. T. HARLOW, V. J. Promponas, E. E. VALLEJO, and C. E. TAYLOR. "Territorial dynamics of Mexican Ant-thrushes Formicarius moniliger revealed by individual recognition of their songs." Ibis (2011).
2010
Agathocleous, M., G. Christodoulou, V. J. Promponas, C. Christodoulou, V. Vassiliades, and A. Antoniou. "Protein Secondary Structure Prediction with Bidirectional Recurrent Neural Nets: Can Weight Updating for Each Residue Enhance Performance?" Artificial Intelligence Applications and Innovations (2010): 128-137.
Ioannou, A., K. Fokianos, and V. J. Promponas. "Spectral density ratio based clustering methods for the binary segmentation of protein sequences: A comparative study." BioSystems 100 (2010): 132-143.
Nikolaou, N., P. Sampaziotis, M. Aplikioti, A. Drakos, Ioannis Kirmitzoglou, M. Argyrou, N. Papamarkos, and V. J. Promponas. "VeSTIS: A Versatile Semi-Automatic Taxon Identification System from Digital Images." (2010).
2009
Papanikolaou, N., K. Trachana, T. Theodosiou, V. J. Promponas, and Ioannis Iliopoulos. "Gene socialization: gene order, GC content and gene silencing in Salmonella." BMC genomics 10 (2009): 597.
Promponas, V. J.. "A simple clustering approach for pathogenic strain identification based on local and global amino acid compositional signatures from genomic sequences: the Escherichia genus case." In Information Technology and Applications in Biomedicine, 2009. ITAB 2009. 9th International Conference on, 1-4. IEEE, 2009.
2008
Savvides, A., V. J. Promponas, and K. Fokianos. "Clustering of biological time series by cepstral coefficients based distances." Pattern Recognition 41 (2008): 2398-2412.
2005
Bagos, P. G., T. D. Liakopoulos, V. J. Promponas, and S. J. Hamodrakas. "Topology prediction of β-barrel outer membrane proteins." PINSA 71 (2005): 19-41.
2004
Papasaikas, P. K., P. G. Bagos, Z. I. Litou, V. J. Promponas, and S. J. Hamodrakas. "PRED-GPCR: GPCR recognition and family classification server." Nucleic acids research 32 (2004): W380-2.

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by Dr. Radut.