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BRL publications

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2015
Kirmitzoglou, Ioannis, and V. J. Promponas. "LCR-eXXXplorer: a web platform to search, visualize and share data for low complexity regions in protein sequences." Bioinformatics (Oxford, England) 31, no. 13 (2015): 2208-10.
Kannas, Christos C., Ioanna Kalvari, George Lambrinidis, Christiana M. Neophytou, Christiana G. Savva, Ioannis Kirmitzoglou, Zinonas Antoniou, Kleo G. Achilleos, David Scherf, Chara A. Pitta et al. "LiSIs: An Online Scientific Workflow System for Virtual Screening." Combinatorial chemistry & high throughput screening 18, no. 3 (2015): 281-95.
Promponas, V. J., Katerina R. Katsani, Benjamin J. Blencowe, and Christos A. Ouzounis. Sequence evidence for common ancestry of eukaryotic endomembrane coatomers In bioRxiv. Cold Spring Harbor Laboratory, 2015.
2014
Pavlopoulos, Georgios A., V. J. Promponas, Christos A. Ouzounis, and Ioannis Iliopoulos. "Biological information extraction and co-occurrence analysis." Methods in molecular biology (Clifton, N.J.) 1159 (2014): 77-92.
Papanikolaou, Nikolas, Georgios A. Pavlopoulos, Evangelos Pafilis, Theodosios Theodosiou, Reinhard Schneider, Venkata P. Satagopam, Christos A. Ouzounis, Aristides G. Eliopoulos, V. J. Promponas, and Ioannis Iliopoulos. "BioTextQuest(+): a knowledge integration platform for literature mining and concept discovery." Bioinformatics (Oxford, England) 30, no. 22 (2014): 3249-56.
Promponas, V. J., Christos A. Ouzounis, and Ioannis Iliopoulos. "Experimental evidence validating the computational inference of functional associations from gene fusion events: a critical survey." Briefings in bioinformatics 15, no. 3 (2014): 443-54.
Katsani, Katerina R., Manuel Irimia, Christos Karapiperis, Zacharias G. Scouras, Benjamin J. Blencowe, V. J. Promponas, and Christos A. Ouzounis. "Functional genomics evidence unearths new moonlighting roles of outer ring coat nucleoporins." Scientific reports 4 (2014): 4655.
Tsiknakis, Manolis, V. J. Promponas, Norbert Graf, May D. Wang, Stephen T. C. Wong, Nikolaos Bourbakis, and Constantinos S. Pattichis. "Guest editorial: Computational solutions to large-scale data management and analysis in translational and personalized medicine." IEEE journal of biomedical and health informatics 18, no. 3 (2014): 720-1.
Kalvari, Ioanna, Stelios Tsompanis, Nitha C. Mulakkal, Richard Osgood, Terje Johansen, Ioannis P. Nezis, and V. J. Promponas. "iLIR: A web resource for prediction of Atg8-family interacting proteins." Autophagy 10, no. 5 (2014): 913-25.
2013
Samara, Pinelopi, Hubert Kalbacher, Kyriaki Ioannou, Dorel L. Radu, Evangelia Livaniou, V. J. Promponas, Wolfgang Voelter, and Ourania Tsitsilonis. "Development of an ELISA for the quantification of the C-terminal decapeptide prothymosin α(100-109) in sera of mice infected with bacteria." Journal of immunological methods 395, no. 1-2 (2013): 54-62.

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by Dr. Radut.