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BRL publications

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2019
Panayidou, Stavria, Kaliopi Georgiades, Theodoulakis Christofi, Stella Tamana, V. J. Promponas, and Yiorgos Apidianakis. Pseudomonas aeruginosa core metabolism exerts a widespread growth-independent control on virulence In bioRxiv. Cold Spring Harbor Laboratory, 2019.
Tørresen, Ole K., Bastiaan Star, Pablo Mier, Miguel A. Andrade-Navarro, Alex Bateman, Patryk Jarnot, Aleksandra Gruca, Marcin Grynberg, Andrey V. Kajava, V. J. Promponas et al. "Tandem repeats lead to sequence assembly errors and impose multi-level challenges for genome and protein databases." Nucleic acids research 47, no. 21 (2019): 10994-11006.
Tamana, Stella, and V. J. Promponas. "An updated view of the oligosaccharyltransferase complex in Plasmodium." Glycobiology 29, no. 5 (2019): 385-396.
2017
Samara, Pinelopi, Vivi Miriagou, Michael Zachariadis, Olga Mavrofrydi, V. J. Promponas, Skarlatos G. Dedos, Panagiota Papazafiri, Hubert Kalbacher, Wolfgang Voelter, and Ourania Tsitsilonis. "A fragment of the alarmin prothymosin α as a novel biomarker in murine models of bacteria-induced sepsis." Oncotarget 8, no. 30 (2017): 48635-48649.
2016
Kyriakou, Dimitris, Emmanouil Stavrou, Panayiota Demosthenous, Georgia Angelidou, Bryan-Joseph San Luis, Charles Boone, V. J. Promponas, and Antonis Kirmizis. "Functional characterisation of long intergenic non-coding RNAs through genetic interaction profiling in Saccharomyces cerevisiae." BMC biology 14, no. 1 (2016): 106.
Klionsky, Daniel J., K. Abdelmohsen, ..., V. J. Promponas, ..., and SM Zughaier. "Guidelines for the use and interpretation of assays for monitoring autophagy (3rd edition)." Autophagy 12, no. 1 (2016): 1-222.
Jacomin, Anne-Claire, Siva Samavedam, V. J. Promponas, and Ioannis P. Nezis. "iLIR database: A web resource for LIR motif-containing proteins in eukaryotes." Autophagy 12, no. 10 (2016): 1945-1953.
Promponas, V. J., Katerina R. Katsani, Benjamin J. Blencowe, and Christos A. Ouzounis. "Sequence evidence for common ancestry of eukaryotic endomembrane coatomers." Scientific reports 6 (2016): 22311.
2015
Promponas, V. J., Ioannis Iliopoulos, and Christos A. Ouzounis. "Annotation inconsistencies beyond sequence similarity-based function prediction - phylogeny and genome structure." Standards in genomic sciences 10 (2015): 108.
Papanikolaou, Nikolas, Georgios A. Pavlopoulos, Evangelos Pafilis, Theodosios Theodosiou, Reinhard Schneider, Venkata P. Satagopam, Christos A. Ouzounis, Aristides G. Eliopoulos, V. J. Promponas, and Ioannis Iliopoulos. "BioTextQuest+: a knowledge integration platform for literature mining and concept discovery." Bioinformatics (Oxford, England) 31, no. 6 (2015): 979.

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by Dr. Radut.