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2009

Papanikolaou, N., K. Trachana, T. Theodosiou, V. J. Promponas, and Ioannis Iliopoulos. "Gene socialization: gene order, GC content and gene silencing in Salmonella." BMC genomics 10 (2009): 597.

2003

Iliopoulos, Ioannis, S. Tsoka, M. A. Andrade, A. J. Enright, M. Carroll, P. Poullet, V. J. Promponas, T. D. Liakopoulos, G. A. Palaios, C. M. Pasquier et al. "Evaluation of annotation strategies using an entire genome sequence." Bioinformatics (Oxford, England) 19 (2003): 717-726.

Vernikos, G. S., C. G. Gkogkas, V. J. Promponas, and S. J. Hamodrakas. "GeneViTo: visualizing gene-product functional and structural features in genomic datasets." BMC bioinformatics 4 (2003): 53.