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BRL publications

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2022
Chatzichristofi, Agathangelos, Vasileios Sagris, Aristos Pallaris, Marios Eftychiou, Ioanna Kalvari, Nicholas Price, Theodosios Theodosiou, Ioannis Iliopoulos, Ioannis P. Nezis, and Vasilis J. Promponas. "LIRcentral: a manually curated online database of experimentally validated functional LIR-motifs." bioRxiv (2022).
2019
Chasapi, Anastasia, Michalis Aivaliotis, Lefteris Angelis, Anastasios Chanalaris, Ioannis Iliopoulos, Ilias Kappas, Christos Karapiperis, Nikos C. Kyrpides, Evangelos Pafilis, Eleftherios Panteris et al. "Establishment of computational biology in Greece and Cyprus: Past, present, and future." PLoS computational biology 15, no. 12 (2019): e1007532.
Iliopoulos, Ioannis, Sophia Ananiadou, Antoine Danchin, John Pa Ioannidis, Peter D. Katsikis, Christos A. Ouzounis, and V. J. Promponas. Hypothesis, analysis and synthesis: it’s all Greek to me! In bioRxiv. Cold Spring Harbor Laboratory, 2019.
Iliopoulos, Ioannis, Sophia Ananiadou, Antoine Danchin, John Pa Ioannidis, Peter D. Katsikis, Christos A. Ouzounis, and V. J. Promponas. "Hypothesis, analysis and synthesis, it's all Greek to me." eLife 8 (2019).
Ntountoumi, Chrysa, Panayotis Vlastaridis, Dimitris Mossialos, Constantinos Stathopoulos, Ioannis Iliopoulos, V. J. Promponas, Stephen G. Oliver, and Grigoris D. Amoutzias. "Low complexity regions in the proteins of prokaryotes perform important functional roles and are highly conserved." Nucleic acids research 47, no. 19 (2019): 9998-10009.
2015
Promponas, V. J., Ioannis Iliopoulos, and Christos A. Ouzounis. "Annotation inconsistencies beyond sequence similarity-based function prediction - phylogeny and genome structure." Standards in genomic sciences 10 (2015): 108.
Papanikolaou, Nikolas, Georgios A. Pavlopoulos, Evangelos Pafilis, Theodosios Theodosiou, Reinhard Schneider, Venkata P. Satagopam, Christos A. Ouzounis, Aristides G. Eliopoulos, V. J. Promponas, and Ioannis Iliopoulos. "BioTextQuest+: a knowledge integration platform for literature mining and concept discovery." Bioinformatics (Oxford, England) 31, no. 6 (2015): 979.
2014
Pavlopoulos, Georgios A., V. J. Promponas, Christos A. Ouzounis, and Ioannis Iliopoulos. "Biological information extraction and co-occurrence analysis." Methods in molecular biology (Clifton, N.J.) 1159 (2014): 77-92.
Papanikolaou, Nikolas, Georgios A. Pavlopoulos, Evangelos Pafilis, Theodosios Theodosiou, Reinhard Schneider, Venkata P. Satagopam, Christos A. Ouzounis, Aristides G. Eliopoulos, V. J. Promponas, and Ioannis Iliopoulos. "BioTextQuest(+): a knowledge integration platform for literature mining and concept discovery." Bioinformatics (Oxford, England) 30, no. 22 (2014): 3249-56.
Promponas, V. J., Christos A. Ouzounis, and Ioannis Iliopoulos. "Experimental evidence validating the computational inference of functional associations from gene fusion events: a critical survey." Briefings in bioinformatics 15, no. 3 (2014): 443-54.

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by Dr. Radut.