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Promponas, V. J., Katerina R. Katsani, Benjamin J. Blencowe, and Christos A. Ouzounis. "Sequence evidence for common ancestry of eukaryotic endomembrane coatomers." Scientific reports 6 (2016): 22311.
Promponas, V. J.. "A simple clustering approach for pathogenic strain identification based on local and global amino acid compositional signatures from genomic sequences: the Escherichia genus case." In Information Technology and Applications in Biomedicine, 2009. ITAB 2009. 9th International Conference on, 1-4. IEEE, 2009.
Promponas, V. J., Ioannis Iliopoulos, and Christos A. Ouzounis. "Annotation inconsistencies beyond sequence similarity-based function prediction - phylogeny and genome structure." Standards in genomic sciences 10 (2015): 108.
Promponas, V. J., A. J. Enright, S. Tsoka, D. P. Kreil, C. Leroy, S. J. Hamodrakas, C. Sander, and Christos A. Ouzounis. "CAST: an iterative algorithm for the complexity analysis of sequence tracts." Bioinformatics (Oxford, England) 16 (2000): 915-922.
Promponas, V. J., Christos A. Ouzounis, and Ioannis Iliopoulos. "Experimental evidence validating the computational inference of functional associations from gene fusion events: a critical survey." Briefings in bioinformatics 15, no. 3 (2014): 443-54.
Promponas, V. J., G. A. Palaios, C. M. Pasquier, J. S. Hamodrakas, and S. J. Hamodrakas. "CoPreTHi: a Web tool which combines transmembrane protein segment prediction methods." In silico biology 1 (1999): 159-162.
Promponas, V. J., Katerina R. Katsani, Benjamin J. Blencowe, and Christos A. Ouzounis. Sequence evidence for common ancestry of eukaryotic endomembrane coatomers In bioRxiv. Cold Spring Harbor Laboratory, 2015.


by Dr. Radut.