People
BRL Members
Head
Dr Vasilis J Promponas [personal page]
Postdoctoral Researchers
Dr Nicholas Price [Plant Population Genomics, Evolution of Selective Autophagy Receptors]
Dr Nicholas Kylilis [Design of efficient synthetic microbial strains][personal page]
Dr Thodosios Theodosiou [Selective Autophagy | Biomedical Text MIning]
PhD Students
Andreas Nicholas Ioannides [Nuclear Pore Complex Subunits]
MSc Students
Bade Dorukan [Synthetic Biology] [Co-supervised with Dr Nicolas Kylilis]
Levon Hakobyan [Synthetic Biology] [Co-supervised with Dr Nicolas Kylilis]
Maria Christophorou [Biomedical Text Mining]
Research Assistants
Agathangelos Chadjichristophi [idLIR project: Literature curator | Method prototyping]
Vasileios Sagris [idLIR Project: Literature curator | Method prototyping]
Marios Eftychiou [idLIR Project: Literature curator | Method prototyping]
Undergraduate Students
Nina Antoniadi [Selective autophagy receptors]
Aristi Konstantinou [Selective autophagy receptors]
Niki Michaela [Synthetic Biology] [Co-supervised with Dr Nicolas Kylilis]
Anastasia Panayi [Synthetic Biology] [Co-supervised with Dr Nicolas Kylilis]
Demetriana Hadjichristou [Synthetic Biology] [Co-supervised with Dr Nicolas Kylilis]
Annita Panteli [Plant Population Genomics] [Co-supervised with Dr Nicholas Price]
Maria Charalambous [Plant Population Genomics] [Co-supervised with Dr Nicholas Price]
Visiting Researchers
Patryk Jarnot (Jan-Mar 2022) (Silesian University of Technology, Poland)
Alumni
Researchers
Kalliopi Georgiadi [postdoctoral researcher, Comparative MIcrobial Genomics - Pseudomonas project]
Nikos Nikolaou [postdoctoral researcher, VeSTIS project]
Nikos Papanikolaou [research assistant, BioTextQuest project]
Stavros Nikolaou [research assistant, BioTextQuest project]
Phd Students
Dr Ioanna Kalvari [Computational approaches for the identification of LIR-motifs in selective autophagy receptor and adaptor proteins]
Dr Stella Tamana [Compositionally Biased Regions: From Structural Signatures To Comparative Genomics]
Dr Athina Theodosiou [Probing the role of rare codons in coding sequences of Escherichia coli]
Dr Ioannis Kirmitzoglou [Development of Algorithms and Tools for Studying Compositionally Biased Regions in Protein Sequences]
George Christodoulou
MSc Students
Katerina Parotsidi (2020) [Computational analysis of transmembrane nucleoporins]
Eleni-Fani Gkotsi (2015) [Developing and validating a pipeline for in silico functional classification of nitrilases
based on sequence data]
Rana Abu-Alhaija (2013) [Resurrecting Skeletons: A protocol to assess coral skeleton surface through laser scanning and photogrammetry] (Co-supervised with Dr. Carlos Jimenez)
Stella Tamana (2011) [Structural and Functional Features of Compositionally Biased Proteins]
Eleni Mitilinaiou (2008) [Low Complexity Regions in Model Plant Genomes]
Dimitris Ioannidis (2007) [Protein-Protein Interactions in the Apoptotic Telomerase Pathways]
Undergraduate students
Marios Eftychiou (2021) [Computational analysis of virus-host interactions: focus on E7 & POU5F1] [Co-supervised with Ass. Prof. Katerina Strati]
Vasileios Sagris (2020) [Computational study of the conservation of LIR-like motifs in homologs of verified LIR-mediated selective macroautophagy receptors/adaptors in Homo sapiens] [RIF Award as best undergraduate thesis in Cyprus for 2020]
Aristos Pallaris (2019) [Computational study of the conservation of LIR-like motifs in homologs of verified LIR-mediated selective macroautophagy receptors/adaptors in Homo sapiens]
Agathangelos Cadjichristofi (2018) [Computational studies of selective macroautophagy receptors/adaptors] [RIF Award as best undergraduate thesis in Cyprus for 2018]
Aikaterini Parotsidi (2017) [Computational study of the proteins of the nuclear envelope and nuclear lamina]
Constantinou Constantina (2016) [The presence of LIR‐motifs in viral proteins is probably not responsible or required for the subversion of autophagy machinery]
Eleni Polyviou (2106) [Study of the involvement of bacteria in autophagy]
Andreas Nicholas Ioannides (2014) [Towards detecting novel moonlighting roles for nuclear pore complex subunits]
Vaso Kasapi (2014) [Heterologous expression and purification of mamalian proteins in Escerichia coli strains: a bioinformatics approach]
Georgia Aggelidou (2012) [SGAcruncher: Development of novel software for analysiing Synthetic Genetic Array data]
Michalis Vasileiadis (2012) [Development of Bioinformatics Methods for studying Mt genomes]
Maria Xenophontos (2011) [Evaluation of methods for transmembrane heliex-helix interaction prediction]
Visiting Researchers
Kristina Kastano (Johannes Gutenberg University, Mainz, Germany)
Dr Ioannis Iliopoulos (Medical School, University of Crete, Greece)
Dr Christos Ouzounis (Kings College, UK | CERTH and Aristotle University, Greece)
Maria Ntertilis (11/2012 -12/2012, 7/2011) (University of Athens, Greece)
Nicholas Price (2008) [Transmembrane Proteins in the C. elegans Genome]
Dr Vasilis Kouvelis (06/2007) (University of Athens, Greece)
External Students
Stalo Dimitriou (2014) [Thymosins and Toll-like receptors] [University of Athens]
Stelios Tsompanis (2013) [Development of In silico methods for detecting selective autophagy receptors in Drosophila] [Award by the Committee for European Educational Programs of the Aristotle University] [ERASMUS Exchange Student]
Agata Combi (2012) [Features of cancer-related gene sequences] [ERASMUS Exchange Student]
Stavros Anagnostopoulos [Expession Profiles of Eukaryotic Transmembrane Proteins] [MSc in Bioinformatics Program, University of Athens]
Giorgos Smaraidos [Low Complexity Regions in Proteomes of Biomedically Important Species] [MSc in Bioinformatics Program, University of Athens]
Nikolaos Galanakis [Low Complexity Regions in Proteomes of Biomedically Important Species] [MSc in Bioinformatics Program, University of Athens]