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Pairwise sequence comparison - a short exersise

Here are a few sequences in FASTA format:
Sequence 1: Collagen alpha-1(II) chain, Homo sapiens 
Sequence 2: Collagen alpha-1(II) chain, Bos taurus
Sequence 3: Glycine-rich RNA-binding protein 8, Arabidopsis thaliana
Let's do the tricks now!
Dot plot using Dotlet (Swiss Institute of Bioinformatics).
Dynamic Programming Global and Local Alignment using hPATM (University of Athens).

by Dr. Radut.