Οι εγγραφές της Protein Data Bank τις οποίες θα μελετήσετε για το σεμινάριό σας είναι οι παρακάτω:
3MYI
3PVF
2W9G
1NQE
1E12
Lecture on Biological Networks and Introduction to Microarray Analysis: PDF slides.
Lecture slides available for download (PDF file).
You may copy the following files into your student account:
Assignment 1:
Group assignments and some initial guidelines [Download].
Here are a few sequences in FASTA format:
Sequence 1: Collagen alpha-1(II) chain, Homo sapiens
Sequence 2: Collagen alpha-1(II) chain, Bos taurus
Sequence 3: Glycine-rich RNA-binding protein 8, Arabidopsis thaliana
Let's do the tricks now!
Dot plot using Dotlet (Swiss Institute of Bioinformatics).
1st package of notes [in Greek].
Covers an introduction in biological macromolecular sequences and computational methods for sequence similarity analysis. [Download].
2nd package of notes [in Greek].
The following book titles are reserved for this course in the UCY library, but also in electronic form (e-book):
- Bioinformatics and Functional Genomics by Jonathan Pevsner, John Wiley & Sons.
- Bioinformatics: A Practical Guide to the Analysis of Genes and Proteins (Methods of Biochemical Analysis) by Andreas D. Baxevanis, and Francis Ouellette, John Wiley& Sons
You may read or borrow them from the UCY library web-page by following the links
Welcome to the BIO 331 - Computational & Systems Biology (formerly: Principles and Methods of Bioinformatics) course!
Here you will find all related information, such as:
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teaching material (presentations, notes)
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data and instructions for assignments
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links to relevant resources
Please, visit the page regularly, it is updated on a regular basis.
